Index

_

__init__() (past.Model.PAST method) (past.Utils.StDataset method)

C

cluster_metrics() (in module past.Evaluation)

cluster_refine() (in module past.Evaluation)

D

default_leiden() (in module past.Evaluation)

default_louvain() (in module past.Evaluation) DLPFC_split() (in module past.Utils)

G

geary_genes() (in module past.Utils)

get_bulk() (in module past.Utils)

I

integration() (in module past.Utils)

L

load_noise() (in module past.Utils)

M

mclust_R() (in module past.Evaluation)

module past

O

optim_parameters() (in module past.Utils)

P

past module

PAST (class in past.Model) preprocess() (in module past.Utils)

R

Ripplewalk_prediction() (in module past.Utils) Ripplewalk_sampler() (in module past.Utils)

run_leiden() (in module past.Evaluation) run_louvain() (in module past.Evaluation)

S

setup_seed() (in module past.Utils) spatial_prior_graph() (in module past.Utils)

StDataset (class in past.Utils) svm_annotation() (in module past.Utils) svm_cross_validation() (in module past.Evaluation)

V

visualize() (in module past.Utils)